Cooper J, Yazvenko N, Peyvan K, Maurer K, Taitt CR, et al. 2010
Targeted Deposition of Antibodies on a Multiplex CMOS Microarray and Optimization of a Sensitive Immunoassay Using Electrochemical Detection.
PLoS ONE 5(3): e9781. doi:10.1371/journal.pone.0009781

Lodes, M. J., D. Suciu, D. Danley, and A. McShea. 2009.
Genotyping arrays.
Integrated Analytical Systems Series: Microarrays. Springer. 121-138.

Cagnin, S., M. Caraballo, C. Guiducci. P. Martini, M. Ross, M Santa Ana, D. Danley, T. West, and G. Lanfranchi. 2009.
Overview of electrochemical DNA biosensors: new approaches to detect the expression of life.
Sensors 9(4), 3122-3148.

Maurer K, Cooper J, Caraballo M, Crye J, Suciu D, Ghindilis A, Leonetti JA, Wang W, Rossi FM, Stover AG, Larson C, Gao H, Dill K, McShea A.
Electrochemically generated Acid and its containment to 100 micron reaction areas for the production of DNA microarrays.
PLoS ONE. 2006 Dec 20;1:e34.

R. H. Liu, S. B. Munro, T. Nguyen, T. Siuda, D. Suciu, M. Bizak, M. Slota, H. S. Fuji, D. Danley, and A. McShea
Integrated Microfluidic CustomArray Device for Bacterial Genotyping and Identification
Journal of the Association for Laboratory Automation, 2006, 11, 360-367.

Grundhoff A, Sullivan CS, Ganem D
A combined computational and microarray-based approach identifies novel microRNAs encoded by human gamma-herpesviruses.
RNA. 2006 May; 12(5): 733-50.

Dill, K., Ghindilis., Schwarzkopf K.
Multiplexed analyte and oligonucleotide detection on microarrays using several redox enzymes in conjunction with electrochemical detection.
Lab Chip, 2006; 6: 1052–1055, DOI: 10.1039/b600126b.

Andrey L. Ghindilis et al.
CombiMatrix oligonucleotide arrays: Genotyping and gene expression assays employing electrochemical detection.
Biosensors and Bioelectronics (2006), DOI: 10.1016/j.bios.2006.06.024.

Liu R, Lodes M, Nguyen T, Siuda T, Slota M, Fuji H.S., McShea A.
Validation of A Fully Integrated Microfluidic Array Device for Influenza A Subtype Identification and Sequencing
Analytical Chemistry, 2006, 78,4184-4193

Nittler M.P, Hocking-Murray D, Foo C, Sil A.
Identification of Histoplasma capsulatum Transcripts Induced in Response to Reactive Nitrogen Species
Molecular Biology of the Cell, 2005 October; 16: 4792–4813

Lodes M, Suciu D, Elliott M, Stover A, Ross M, Carabello M, Dix K, Crye J, Webby R, Lyon W, Danley D, McShea A.
Use of Semiconductor-Based Oligonucleotide Microarrays for Influenza A Virus Subtype Identification and Sequencing
Journal of Clinical Microbiology, 2006 April; 44(4): 1209–1218

Liu R. H., Dill K, Fuji H. S., McShea A.
Integrated microfluidic biochips for DNA microarray analysis
Expert Review of Molecular Diagnostics. 2006; 6(2): 253-261

Liu R.H., Nugyen T, Schwarzkopf K, Fuji H. S., Petrova A,  Siuda T, Peyvan K, Bizak M, Danley D, McShea A.
A Fully Integrated Miniature Device for Automated Gene Expression DNA Microarray Processing
Analytical Chemistry. 2006; 78: 1980-1986

Wells C, Chalk A.
Alternate transcription of the Toll-like receptor signaling cascade
Genome Biology 2006; 7:R10.

Maurer K, McShea A, Strathmann M, Dill K.
The removal of the t-BOC group by electrochemically generated acid and use of an addressable electrode array for peptide synthesis.
J Comb Chem 2005 Sep-Oct;7(5):637-40. No abstract available.

Oleinikov AV, Zhao J, Gray MD.
RNA interference by mixtures of siRNAs prepared using custom oligonucleotide arrays
Nucleic Acids Res. 2005 Jun 7;33(10):e92.

Kumar A, Anderson B, Dill K.
Electrochemical detection for microarray IVD applications
IVD Technology 2005 May

Kumar A, Anderson B, Dill K.
Detection Technologies
IVD Technology 2005 April

Tian J, Maurer K, Tesfu E, Moeller KD.
Building addressable libraries: the use of electrochemistry for spatially isolating a heck reaction on a chip
J Am Chem Soc. 2005 Feb 9;127(5):1392-3.

Dill K, Montgomery DD, Ghindilis AL, Schwarzkopf KR, Ragsdale SR, Oleinikov AV.
Immunoassays based on electrochemical detection using microelectrode arrays.
Biosens Bioelectron. 2004 Nov 1;20(4):736-42.

Rhodes D, Yu J, Shanker K , Deshpande N, Varambally R, Ghosh D, Barrette T, Pandey A,
Chinnaiyan A.
Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
Proceedings of the National Academy of Sciences 2004 June 22; 101(25): 9309–14

Oleinikov AV, Gray MD, Zhao J, Montgomery DD, Ghindilis AL, Dill K.
Self-assembling protein arrays using electronic semiconductor microchips and in vitro translation
J Proteome Res. 2003 May-Jun;2(3):313-9.

Tesfu E, Maurer K, Ragsdale SR, Moeller KD.
Building addressable libraries: the use of electrochemistry for generating reactive Pd(II) reagents at preselected sites on a chip
J Am Chem Soc. 2004 May 26;126(20):6212-3. No abstract available.

Dill K, Montgomery DD, Ghindilis AL, Schwarzkopf KR.
Immunoassays and sequence-specific DNA detection on a microchip using enzyme amplified electrochemical detection
J Biochem Biophys Methods. 2004 May 31;59(2):181-7.

Dill K, Montgomery D, Wang W, Tsai J.
Antigen detection using microelectrode array microchips
Analytica Chimica Acta. 2004: 69–78

Rhodes D, Yu J, Shanker K , Deshpande N, Varambally R, Ghosh D, Barrette T, Pandey A,
Chinnaiyan A.
Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
Proceedings of the National Academy of Sciences 2004 June 22; 101(25): 9309–14

Arjomand A, Kumar A
Integration of RNAi into drug discovery
2003 November

Arjomand A, Kumar A
An open-platform microarray system for R&D
2003 June

The CombiMatrix group currently has four patents issued in the United States, three patents issued in Europe and 80 patent applications pending in the United States, Europe and elsewhere.